gatk3的最后一个经典版本3.8

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David Roazen 41fef329b4 Update scripts for depristo -> gsa-engineering migration		2013-09-25 12:57:49 -04:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Updated docs to tell users not to use PCR indel error modeling for PCR free data.	2013-09-23 15:48:47 -04:00
public	Provide close methods to clean up resources used while creating AlignmentContexts from BAM file regions. Allows utilization of CoveredLocusView via the API	2013-09-10 15:32:54 -04:00
settings	- update picard, sam, variants and tribble after fixing bug in BCF2Utils.makeDictionary as reported in ticket 52571227	2013-08-21 12:06:42 -04:00
.gitignore	Detect stuck lock-acquisition calls, and disable file locking for tests	2013-04-24 22:49:02 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
build.xml	build.xml: make ant -p output only important build targets	2013-07-19 14:35:00 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00

The Genome Analysis Toolkit