gatk-3.8/java/src/org/broadinstitute/sting/utils/cmdLine
kiran 40dbc21df7 Moved ParseException to it's own file and made it public.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@750 348d0f76-0448-11de-a6fe-93d51630548a
2009-05-19 14:42:44 +00:00
..
Argument.java Argument validation. 2009-05-07 20:28:56 +00:00
ArgumentCollection.java added the argument collection annotation for situations where fields in a command line args have embedded fields that should be checked for command line args 2009-05-09 06:59:17 +00:00
ArgumentDefinitions.java New GATKArgumentCollection caused a subtle bug with argument grouping and the help system. Fixed. 2009-05-17 14:54:25 +00:00
ArgumentMatches.java Mutually exclusive options. 2009-05-07 13:27:48 +00:00
CommandLineProgram.java Fix for GSA-44...don't throw exception when user specifies -h. 2009-05-18 00:42:00 +00:00
HelpFormatter.java Beefed up command-line usage string. 2009-05-07 19:08:19 +00:00
ParseException.java Moved ParseException to it's own file and made it public. 2009-05-19 14:42:44 +00:00
ParsingEngine.java Moved ParseException to it's own file and made it public. 2009-05-19 14:42:44 +00:00
ParsingMethod.java Disable support for short name values directly abutting their arguments. 2009-05-17 16:09:32 +00:00