ebanks 40d305bc7e Added test of Nway cleaning for Matt; thanks to Aaron for the help. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2977 348d0f76-0448-11de-a6fe-93d51630548a		2010-03-10 21:00:41 +00:00
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alignment	oops - didn't mean to check this in	2010-03-02 20:28:22 +00:00
gatk	Added test of Nway cleaning for Matt; thanks to Aaron for the help.	2010-03-10 21:00:41 +00:00
oneoffprojects/walkers	Support for validationRate calculation in variant eval 2; better error messages for failed genome loc parsing; tolerance to odd whitespace in plinkrod, and fix for monomorphic sites in vcf2variantcontext.	2010-03-10 16:25:16 +00:00
playground/gatk/walkers	Renaming and moving relevant tools into a sequenom directory	2010-03-10 02:31:10 +00:00
utils	Moving UnifiedGenotyper and VariantAnnotator over to VariantContext system.	2010-03-09 03:41:07 +00:00
BaseTest.java	added root GATKData variable	2010-02-12 15:25:34 +00:00
TrivialInstrumenter.java	fixed a bunch of comments and license headers.	2009-06-10 14:10:46 +00:00
WalkerTest.java	another test-with-multiple outputs fix	2010-03-04 22:46:15 +00:00