aaron 40af4f085c Adding some utilities to test unmapped reads ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@887 348d0f76-0448-11de-a6fe-93d51630548a		2009-06-03 07:40:34 +00:00
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gatk	A fix for the 'rod blows up when it hits a GenomeLoc outside the reference' issu	2009-06-02 18:14:46 +00:00
playground	The flagStatReadWalker generates the exact same statistical output as the samtools flagstat command, so the two outputs can be diff'ed.	2009-06-02 21:23:56 +00:00
secondarybase	Update to latest version of picard. Change imports in all classes dependent on picard public from import edu.mit.broad.picard... to import net.sf.picard...	2009-05-28 20:13:01 +00:00
utils	Adding some utilities to test unmapped reads	2009-06-03 07:40:34 +00:00