gatk3的最后一个经典版本3.8

Eric Banks 406adb8d44 The allele biased downsampling should not abort if there's a reduced read. Rather it should always keep the RR and downsample only original reads in the pileup.		2012-12-05 23:15:36 -05:00
licensing	Final final final version of the license.	2012-07-20 18:00:02 -04:00
protected/java	The allele biased downsampling should not abort if there's a reduced read. Rather it should always keep the RR and downsample only original reads in the pileup.	2012-12-05 23:15:36 -05:00
public	PrintReads large-scale test to protect against another major low-level performance issue	2012-12-05 21:36:27 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Refactored entire NA12878KB to allow us to easily build a na12878kb.jar for IGV integration	2012-11-29 14:38:09 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Use build jars in test classpaths by default	2012-11-28 22:57:04 -05:00