rpoplin c6351a11d6 Clearer logger output when not using by-hapmap ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4308 348d0f76-0448-11de-a6fe-93d51630548a		2010-09-18 16:10:42 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Clearer logger output when not using by-hapmap	2010-09-18 16:10:42 +00:00
test	CombineVariants now outputs the command line in the VCF header. Added a new hidden argument to VR walkers called --NoByHapMapValidationStatus to turn off the by-hapmap dbsnp rod behavior. Very useful for experimenting with which sets to use as training data.	2010-09-18 16:06:50 +00:00