gatk3的最后一个经典版本3.8

Scott Frazer 3ffba77656 Revert "initial cancer pipeline with mutations and partial indel support" ... This reverts commit 4a2e5b1fcc3ad53dbb26d43eed1220b0257e9901.		2012-10-04 11:37:54 -04:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	Fixed ReduceReads bug where variant regions were missing.	2012-09-19 16:09:08 -04:00
public	Revert "initial cancer pipeline with mutations and partial indel support"	2012-10-04 11:37:54 -04:00
settings	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Convert external.build.dir and external.dist.dir back to paths	2012-08-15 23:04:10 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00