gatk3的最后一个经典版本3.8

David Roazen 3f7d888ea5 run_parallel_tests.sh: further improvements ... -accept global timeout as a command-line argument -kill outstanding jobs when timeout reached -print job output files to stdout so that they get recorded in bamboo's logs -periodically print number of jobs outstanding during run -documentation / comments		2013-03-01 14:59:10 -05:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected	Split long-running integration test classes into multiple classes	2013-03-01 13:55:23 -05:00
public	Merge pull request #76 from broadinstitute/md_kb_bugfix_GSA-795	2013-03-01 10:52:16 -08:00
settings	Haplotype/Allele based optimizations for the HaplotypeCaller that knock off nearly 20% of the total runtime (multi-sample).	2013-02-21 10:14:11 -05:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Experimental script to run tests using class-level parallelism on the farm	2013-02-28 16:51:58 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00