19 lines
1.0 KiB
XML
19 lines
1.0 KiB
XML
<?xml version="1.0" encoding="UTF-8"?>
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<package name="QualityScoresRecalibration">
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<executable name="QualityScoresRecalibration">
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<main-class name="org.broadinstitute.sting.gatk.CommandLineGATK" />
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<resource-bundle file="StingText.properties" />
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<dependencies>
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<!-- Quality scores recalibration -->
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<class file="org.broadinstitute.sting.gatk.walkers.recalibration.CovariateCounterWalker" />
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<class file=">org.broadinstitute.sting.gatk.walkers.recalibration.TableRecalibrationWalker" />
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<!-- Recalibration Covariates -->
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<class file=">org.broadinstitute.sting.gatk.walkers.recalibration.DinucCovariate" />
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<class file=">org.broadinstitute.sting.gatk.walkers.recalibration.QualityScoreCovariate" />
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<class file=">org.broadinstitute.sting.gatk.walkers.recalibration.CycleCovariate" />
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<class file=">org.broadinstitute.sting.gatk.walkers.recalibration.ReadGroupCovariate" />
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<class file=">org.broadinstitute.sting.gatk.walkers.recalibration.TileCovariate" />
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</dependencies>
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</executable>
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</package>
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