gatk-3.8/java
aaron 3dc4d3c3a9 removing the custom reflections library from the libs, and adding a release version. Hopefully this will fix the problem Menachem has been seeing with random JVM crashes. Also
removed the auto-deletion of the reflections jar, and removed the very old OmniPlan document we had checked-in.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4056 348d0f76-0448-11de-a6fe-93d51630548a
2010-08-19 00:42:37 +00:00
..
config Provide a default logger, some config settings, and some doc updates. 2009-04-29 02:06:05 +00:00
src removing the custom reflections library from the libs, and adding a release version. Hopefully this will fix the problem Menachem has been seeing with random JVM crashes. Also 2010-08-19 00:42:37 +00:00
test Memory optimization for the VariantRecalibrator. Only add variants to the list if they pass the novelty and qual filters. 2010-08-17 21:57:28 +00:00