Khalid Shakir 1f8fc4a041 Added edu.mit.broad.picard to Queue packaged jar. ... Added hack to workaround EDU.oswego namespace and staging on mac case-insensitive filesystems.		2011-07-23 14:40:29 -04:00
..
Aligner.xml	…
AnalyzeCovariates.xml	Removed TileCovariate as a dependency for AnalyzeCovariates.jar	2011-07-11 12:10:11 -04:00
CreatePackager.xsl	…
FindContaminatingReadGroups.xml	…
GATK-Picard.xml	…
GATKEngine.xml	Fixes to the packaging system to work with the new directory structure.	2011-06-30 18:27:17 -04:00
GATKResources.xml	…
GenomeAnalysisTK.xml	Moving AnalyzeAnnotations into the archive because it has outlived its usefulness.	2011-07-02 10:39:53 -04:00
IndelGenotyper.xml	…
LocalRealignmentAroundIndels.xml	…
PicardPrivate.xml	Using picard implementations for accessing aggregation directories.	2011-07-18 21:49:03 -04:00
QualityScoresRecalibration.xml	…
Queue.xml	Added edu.mit.broad.picard to Queue packaged jar.	2011-07-23 14:40:29 -04:00
RMDIndexer.xml	…
UnifiedGenotyper.xml	…
VariantAnnotator.xml	…
VariantEval.xml	…
VariantFiltration.xml	…
VariantRecalibration.xml	…