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VectorPairHMM
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Update pom versions to mark the start of GATK 3.7 development
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2016-06-01 17:21:48 -04:00 |
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c
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After renaming the packages, instead of updating the JNI library used for testing bwa, moving the classes to the archive.
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2014-05-19 17:36:41 -04:00 |
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chainFiles
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The contig is named MT not M in b36. Delivers PT68890442.
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2014-04-08 10:03:47 -04:00 |
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doc
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Updated readme in public/doc to just point to the website
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2015-03-12 11:52:48 -04:00 |
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external-example
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Update pom versions to mark the start of GATK 3.7 development
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2016-06-01 17:21:48 -04:00 |
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gatk-engine
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Throw an exception if the BQSR input covariants file is not found
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2016-08-11 12:46:14 -04:00 |
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gatk-queue
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Update pom versions to mark the start of GATK 3.7 development
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2016-06-01 17:21:48 -04:00 |
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gatk-queue-extensions-generator
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Update pom versions to mark the start of GATK 3.7 development
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2016-06-01 17:21:48 -04:00 |
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gatk-queue-extensions-public
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Update pom versions to mark the start of GATK 3.7 development
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2016-06-01 17:21:48 -04:00 |
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gatk-root
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Added support for directly reading SRA runs
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2016-08-02 15:21:14 -04:00 |
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gatk-tools-public
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fix 1430 for genotype filters; refactored filter() method; added unit and integration test; more comprehensive fix must be done first on htsjdk side in JEXLMap (#1456)
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2016-09-06 17:30:18 -04:00 |
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gatk-utils
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Bypass spanning deletions in Rank Sum tests
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2016-08-17 14:02:22 -04:00 |
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gsalib
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Update pom versions to mark the start of GATK 3.7 development
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2016-06-01 17:21:48 -04:00 |
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java/config
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Refactored maven directories and java packages replacing "sting" with "gatk".
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2014-05-19 17:36:39 -04:00 |
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package-tests
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Update pom versions to mark the start of GATK 3.7 development
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2016-06-01 17:21:48 -04:00 |
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repo
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Move htsjdk and picard to version 2.3.0
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2016-05-16 14:50:00 -04:00 |
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src/main
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Added faster built executable, non-packaged jars.
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2014-11-05 00:30:46 +08:00 |
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pom.xml
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Update pom versions to mark the start of GATK 3.7 development
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2016-06-01 17:21:48 -04:00 |
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