gatk3的最后一个经典版本3.8

Ryan Poplin 3c7db87527 Merge pull request #189 from broadinstitute/md_hc_clip_before_merging ... Bugfix for FragmentUtils.mergeOverlappingPairedFragments		2013-04-25 08:42:03 -07:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected	Bugfix for FragmentUtils.mergeOverlappingPairedFragments	2013-04-25 11:11:15 -04:00
public	Bugfix for FragmentUtils.mergeOverlappingPairedFragments	2013-04-25 11:11:15 -04:00
settings	Don't allow users to specify keys and IDs that contain angle brackets or equals signs (not allowed in VCF spec).	2013-04-05 00:52:32 -04:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Add additional necessary class files to na12878kb.jar target	2013-04-23 14:03:48 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00