Eric Banks 79bc818022 Bug fix for VariantsToVCF: old dbSNP files can have '-' as reference base and those records always need to be padded.		2013-01-16 16:15:58 -05:00
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alignment	Updated all JAVA file licenses accordingly	2013-01-10 17:06:41 -05:00
commandline	Re-committing the following changes from Dec 18:	2013-01-16 12:43:15 -05:00
gatk	Bug fix for VariantsToVCF: old dbSNP files can have '-' as reference base and those records always need to be padded.	2013-01-16 16:15:58 -05:00
jna	Updated all JAVA file licenses accordingly	2013-01-10 17:06:41 -05:00
queue	Updated all JAVA file licenses accordingly	2013-01-10 17:06:41 -05:00
tools	Updated all JAVA file licenses accordingly	2013-01-10 17:06:41 -05:00
utils	Massive expansion of ActiveRegionTraversal unit tests, resulting in several bugfixes to ART	2013-01-16 15:30:00 -05:00