gatk3的最后一个经典版本3.8

Mark DePristo 3c476a92a2 Add dummy functionality (currently throws an error) to allow HC to include unmapped reads during assembly and calling		2013-01-16 16:25:36 -05:00
licensing	Cleaning CRLF terminations in the licenses	2013-01-10 17:06:29 -05:00
protected/java	Add dummy functionality (currently throws an error) to allow HC to include unmapped reads during assembly and calling	2013-01-16 16:25:36 -05:00
public	Bug fix for VariantsToVCF: old dbSNP files can have '-' as reference base and those records always need to be padded.	2013-01-16 16:15:58 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Updating Queue maven version to 0.0.2	2013-01-10 13:46:49 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	ReadBackedPileup cleanup	2013-01-11 15:17:18 -05:00