gatk3的最后一个经典版本3.8

Mark DePristo 3bbdccb0ae Refactor and cleanup GATKPerformanceOverTime ... -- Use single read group BAM file for BQSR -- Implement terrible (but clever) hack to support BQSR v1 and v2 in a single Scala class.		2012-08-24 15:57:48 -04:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	Merged bug fix from Stable into Unstable	2012-08-22 14:40:34 -04:00
public	Code cleanup in MVLR and SelectVariants. Should fix JIRA GSA-509 and GSA-510	2012-08-24 12:25:11 -07:00
settings	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
build.xml	Convert external.build.dir and external.dist.dir back to paths	2012-08-15 23:04:10 -04:00
ivy.xml	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00