hanna 3b79f9eddc Support 'N's and other mismatch characters in the reference. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1721 348d0f76-0448-11de-a6fe-93d51630548a		2009-09-24 21:41:30 +00:00
..
config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	Support 'N's and other mismatch characters in the reference.	2009-09-24 21:41:30 +00:00
test/org/broadinstitute/sting	changes to add VCF to the rod system, fix VCF output in VariantsToVCF, and some other minor changes	2009-09-24 15:16:11 +00:00