gatk-3.8/public/java/test/org/broadinstitute/sting
Mark DePristo 3b799db61a RefMetaDataTracker cleanup and unit tests
You know have to provide an explicit list of RODRecordLists upfront to the constructor.  RefMetaDataTracker is now immutable.  Changes in engine to incorporate these differences
Extensive UnitTests for RefMetaDataTracker now.
2011-07-29 13:23:17 -04:00
..
alignment Reinitialize random seed in the bwa bindings from the fixed seed stored in the 2011-07-22 13:41:53 -04:00
commandline Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
gatk RefMetaDataTracker cleanup and unit tests 2011-07-29 13:23:17 -04:00
jna Memory limits changed from Int to Double. 2011-07-21 22:57:18 -04:00
pipeline Cleanup of the utils.broad package. 2011-07-01 20:47:03 -04:00
utils Moved all of the distributed GATK code to archive. 2011-07-22 09:20:32 -04:00
BaseTest.java Walker test system refactoring. All MD5DB related functions are now in MD5DB.java. 2011-07-18 10:46:01 -04:00
MD5DB.java Go for global integrationtest path first, if possible. 2011-07-26 17:35:30 -04:00
StingTextReporter.java Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
WalkerTest.java Walker test system refactoring. All MD5DB related functions are now in MD5DB.java. 2011-07-18 10:46:01 -04:00