gatk-3.8/public/java
Mark DePristo b06074d6e7 Updated SortingVCFWriterBase to use PriorityBlockingQueue so that the class is thread-safe
-- Uses PriorityBlockingQueue instead of PriorityQueue
-- synchronized keywords added to all key functions that modify internal state

Note that this hasn't been tested extensivesly.  Based on report:

http://getsatisfaction.com/gsa/topics/missing_loci_output_in_multi_thread_mode_when_implement_sortingvcfwriterbase?utm_content=topic_link&utm_medium=email&utm_source=new_topic
2012-01-13 09:33:16 -05:00
..
config Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
src Updated SortingVCFWriterBase to use PriorityBlockingQueue so that the class is thread-safe 2012-01-13 09:33:16 -05:00
test Added "unbiased" downsampling parameter to PrintReads 2012-01-12 16:33:55 -05:00