chartl 3a4844ebde Additional partition types into DepthOfCoverage: ... - Sequencing Center - Platform - Sample by Center - Sample by Platform - Sample by Platform by Center <---- needed for analysis I'm doing The fact that the latter three needed their own partition types, rather than being dictatable from the command line, combined with the new hierarchical traversal types, and new output formatting engine, suggest that DepthOfCoverageV3 is about ready to be retired in favor of a newer, sleeker version. For now, this will do. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4193 348d0f76-0448-11de-a6fe-93d51630548a		2010-09-02 19:30:03 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Additional partition types into DepthOfCoverage:	2010-09-02 19:30:03 +00:00
test	Replaced placeholder support for splitting by read group with read support (sorry everyone), and added relatively comprehensive unit tests to ensure that splitting by read group works.	2010-09-01 22:24:50 +00:00