Mauricio Carneiro df965d4a5a Fixing BQSR integration test		2012-07-21 11:11:45 -04:00
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bqsr	Fixing BQSR integration test	2012-07-21 11:11:45 -04:00
compression/reducereads	Updating default value for -mindel to the one used by Khalid in the pipeline and me in my tests.	2012-07-10 02:04:26 -04:00
genotyper	FisherStrand now uses RankSumTest isUsableBase to decide if a read should be included in testing	2012-07-18 16:07:47 -04:00
haplotypecaller	New function for merging nearby events into MNPs or complex substitutions. Added extensive unit tests.	2012-07-19 13:16:33 -04:00