Mark DePristo 39b4e76fde Continuing refactoring of RefMetaDataTracker. ... On the path towards converging getVariantContext() and getValues() in tracker so that we can have a single approach to get values from RODs with the new RodBinding() types		2011-07-28 17:48:28 -04:00
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arguments	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
datasources	Continuing refactoring of RefMetaDataTracker.	2011-07-28 17:48:28 -04:00
executive	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
filters	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
iterators	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
refdata	Actually should have been gone...	2011-07-25 13:27:42 -04:00
report	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
traversals	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
walkers	Uncovered fundamental accounting bug in VariantEval. Will be fixed by dev. team	2011-07-28 14:19:27 -04:00
GenomeAnalysisEngineUnitTest.java	Fixing broken paths to the testdata directory throughout the codebase.	2011-06-29 17:36:47 -04:00
WalkerManagerUnitTest.java	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00