Eric Banks b099e2b4ae Moving integration tests to protected		2013-01-08 09:34:08 -05:00
..
CNV	BCF2 with support symbolic alleles	2012-06-30 11:22:48 -04:00
coverage	Fix bugs as reported on the forum: BED needs to be explicitly set as the default output format and the output didn't actually adhere to the BED spec.	2012-11-08 15:07:47 -05:00
diagnostics/targets	Moving integration tests to protected	2013-01-08 09:34:08 -05:00
qc	Moved (nearly) all Walkers from public to protected and removed GATKLite utils	2013-01-07 14:42:40 -05:00
readutils	Moved (nearly) all Walkers from public to protected and removed GATKLite utils	2013-01-07 14:42:40 -05:00
BAQIntegrationTest.java	merge master	2011-10-25 16:08:39 -04:00