gatk3的最后一个经典版本3.8

Eric Banks 387c0defed don't change md5 here because I am handling it separately from unstable with a better command-line in the test		2012-12-03 21:49:45 -05:00
licensing	Final final final version of the license.	2012-07-20 18:00:02 -04:00
protected/java	Updating the HC integration test md5s. According to the NA12878 knowledge base this commit cuts down the FP rate by more than 50 percent with no loss in sensitivity.	2012-12-03 15:38:59 -05:00
public	Bug fix for RR: don't let the softclip start position be less than 1	2012-12-03 15:59:14 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Refactored entire NA12878KB to allow us to easily build a na12878kb.jar for IGV integration	2012-11-29 14:38:09 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Use build jars in test classpaths by default	2012-11-28 22:57:04 -05:00