Ernesto Brau e8b42c4dfd Use GKL's implementation of Vector Logless Pair HMM ... Fixed MuTect2 tests by removing old -alwaysloadVectorHmm flag; upgraded to GKL 0.5.2; FASTEST_AVAILABLE pairhmm option; improved documenting comments in code Made FASTEST_AVAIALABLE the default for the pairHMM cmdline argument Make LOGLESS_CACHING the default pairHMM unified cmdline argument, fix error message if choose an unrecognized pairHMM Updae MD5s		2017-06-07 13:33:32 -04:00
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pom.xml	Use GKL's implementation of Vector Logless Pair HMM	2017-06-07 13:33:32 -04:00