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gatk-3.8/public/java/test/org/broadinstitute/sting/gatk/walkers
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Mark DePristo 4f8fc0f2f1 VCF3 now dynamically determined 2011-08-08 15:05:47 -04:00
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annotator Updated IntegrationTests to use the new type free format for VCF files 2011-08-08 15:04:38 -04:00
beagle --variants throughout integrationtests 2011-08-02 20:28:47 -04:00
coverage Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
diffengine GATKReport v0.2: 2011-08-03 00:24:47 -04:00
fasta Updated IntegrationTests to use the new type free format for VCF files 2011-08-08 15:04:38 -04:00
filters Need to rename the integration test argument -mask to -maskName 2011-08-07 13:32:26 -04:00
genotyper Updated IntegrationTests to use the new type free format for VCF files 2011-08-08 15:04:38 -04:00
indels Updated IntegrationTests to use the new type free format for VCF files 2011-08-08 15:04:38 -04:00
phasing Updated IntegrationTests to use the new type free format for VCF files 2011-08-08 15:04:38 -04:00
qc Continuing progress towards RodBinding 1.0 2011-08-03 17:19:28 -04:00
recalibration VCF3 now dynamically determined 2011-08-08 15:05:47 -04:00
validation Continuing progress towards RodBinding 1.0 2011-08-03 17:19:28 -04:00
varianteval VCF3 now dynamically determined 2011-08-08 15:05:47 -04:00
variantrecalibration Updated IntegrationTests to use the new type free format for VCF files 2011-08-08 15:04:38 -04:00
variantutils Updated IntegrationTests to use the new type free format for VCF files 2011-08-08 15:04:38 -04:00
BAQIntegrationTest.java Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
ClipReadsWalkersIntegrationTest.java Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
PileupWalkerIntegrationTest.java Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
PrintReadsIntegrationTest.java Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
PrintReadsWalkerUnitTest.java Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00