Ryan Poplin 943b1d34f8 intermediate commit to aid in debugging HC / exact model changes. HC integration tests will still fail		2012-03-18 15:50:27 -04:00
..
R	GATKReport v1.0	2012-03-12 23:09:19 -04:00
c	At chartl's request, add the bwa aln -N and bwa aln -m parameters to the bindings.	2012-01-17 14:47:53 -05:00
chainFiles	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
doc	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
java	intermediate commit to aid in debugging HC / exact model changes. HC integration tests will still fail	2012-03-18 15:50:27 -04:00
keys	Public-key authorization scheme to restrict use of NO_ET	2012-03-06 00:09:43 -05:00
packages	Public-key authorization scheme to restrict use of NO_ET	2012-03-06 00:09:43 -05:00
perl	Update to the bindings for liftOverVCF.pl (to -V from -B)	2011-09-15 15:33:09 -04:00
scala	Merge branch 'master' of ssh://gsa1.broadinstitute.org/humgen/gsa-scr1/gsa-engineering/git/unstable	2012-03-13 09:28:16 -04:00
testdata	adding on-the-fly recalibration test data	2012-03-16 13:18:16 -04:00