gatk3的最后一个经典版本3.8

Chris Hartl 3753209584 One md5sum slipped past in the HC integration test.		2013-01-02 15:09:28 -05:00
licensing	Final final final version of the license.	2012-07-20 18:00:02 -04:00
protected/java	One md5sum slipped past in the HC integration test.	2013-01-02 15:09:28 -05:00
public	QD is now divided by the average length of the alternate allele (weighted by the allele count). The average length is stored in a related annotation, "AAL", which can be used to re-compute the "old" QD by simple multiplication. Integration tests *should* all pass.	2013-01-02 14:41:29 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Re-enabling contracts in tests in build.xml	2013-01-02 11:29:25 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Use build jars in test classpaths by default	2012-11-28 22:57:04 -05:00