ebanks 36fb6ca3c5 Allow user to specify the compression to be used when writing out BAM files. ... Updated most of the walkers to reflect this change. Now it won't take forever to write BAMs! git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@909 348d0f76-0448-11de-a6fe-93d51630548a		2009-06-05 08:48:34 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	Allow user to specify the compression to be used when writing out BAM files.	2009-06-05 08:48:34 +00:00
test/org/broadinstitute/sting	We're no longer in the read-dropping business.	2009-06-04 22:37:51 +00:00