kshakir 8d294dd6e6 For the snps to create combine snps and filtered indels, now using a VCF with just snps instead of vcf with snps plus unfiltered indels. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5904 348d0f76-0448-11de-a6fe-93d51630548a		2011-05-29 04:17:18 +00:00
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HybridSelectionPipeline.scala	Switched arguments from short name to long name.	2011-05-25 17:24:56 +00:00
WholeGenomePipeline.scala	For the snps to create combine snps and filtered indels, now using a VCF with just snps instead of vcf with snps plus unfiltered indels.	2011-05-29 04:17:18 +00:00
recalibrate.scala	Walkers can now specify a class extending from Gatherer to merge custom output formats. Add @Gather(MyGatherer.class) to the walker @Output.	2011-03-24 14:03:51 +00:00