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gatk-3.8/java/src/org/broadinstitute/sting
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aaron 36819ed908 Initial changes to the SSG to output GLF by default 
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1231 348d0f76-0448-11de-a6fe-93d51630548a
 		2009-07-14 08:46:04 +00:00
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gatk Skip validation in case of no reads aligning. 2009-07-14 02:03:36 +00:00
playground Initial changes to the SSG to output GLF by default 2009-07-14 08:46:04 +00:00
secondarybase Cleanup...deprecate FastaSequenceFile2 in favor of IndexedFastaSequenceFile or ReferenceSequenceFile from Picard, depending on the application. 2009-07-08 18:49:08 +00:00
utils Initial changes to the SSG to output GLF by default 2009-07-14 08:46:04 +00:00