Mauricio Carneiro 367f0c0ac1 Split class names into stratification and metrics ... Calling everything statistics was very confusing. Diagnose Targets stratifies the data three ways: Interval, Sample and Locus. Each stratification then has it's own set of metrics (plugin system) to calculate -- LocusMetric, SampleMetric, IntervalMetric. Metrics are generalized by the Metric interface. (for generic access) Stratifications are generalized by the AbstractStratification abstract class. (to aggressively limit code duplication)		2013-04-24 14:15:49 -04:00
..
gatk/walkers	Split class names into stratification and metrics	2013-04-24 14:15:49 -04:00
utils	Select the haplotypes we move forward for genotyping per sample, not pooled	2013-04-16 09:42:03 -04:00