Eric Banks 360e2ba87e Fixed bug reported on the forum where using the --exclude_sample_file argument in SV was giving bad results. ... Added integration test. https://www.pivotaltracker.com/s/projects/793457/stories/47399245		2013-04-26 12:23:11 -04:00
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java	Fixed bug reported on the forum where using the --exclude_sample_file argument in SV was giving bad results.	2013-04-26 12:23:11 -04:00
scala/test/org/broadinstitute/sting/queue/pipeline/examples	Fix improper dependencies in QScripts used by pipeline tests, and attempt to fix the flawed MisencodedBaseQualityUnitTest	2013-02-27 04:45:53 -05:00