gatk3的最后一个经典版本3.8

Eric Banks 360e2ba87e Fixed bug reported on the forum where using the --exclude_sample_file argument in SV was giving bad results. ... Added integration test. https://www.pivotaltracker.com/s/projects/793457/stories/47399245		2013-04-26 12:23:11 -04:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected	Fixed bug reported on the forum where using the --exclude_sample_file argument in SV was giving bad results.	2013-04-26 12:23:11 -04:00
public	Fixed bug reported on the forum where using the --exclude_sample_file argument in SV was giving bad results.	2013-04-26 12:23:11 -04:00
settings	Don't allow users to specify keys and IDs that contain angle brackets or equals signs (not allowed in VCF spec).	2013-04-05 00:52:32 -04:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Add additional necessary class files to na12878kb.jar target	2013-04-23 14:03:48 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00