gatk-3.8

gatk3的最后一个经典版本3.8

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Mark DePristo 3593996a87 G1K summary table needs to use the -keepAC0 flag -- AC = 0 sites look about as good as singletons, and are likely only AC 0 because they cannot be easily imputed. We keep them in our counting.		2012-04-04 15:37:43 -04:00
public	VariantEval now includes -keepAC0 argument to include sites with alt alleles but AC 0 in analyses	2012-04-04 15:37:12 -04:00
settings	Rev. tribble to fix BED codec bug in tribble 51	2012-01-17 16:40:26 -05:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
LICENSE	Updated license year	2012-03-27 14:32:02 -04:00
build.xml	Bug fix to previous UnifiedGenotyperEngine refactoring, removed debug code	2012-03-25 10:20:21 -04:00
ivy.xml	S3 upload now directly creates the XML report in memory and puts that in S3	2012-01-29 15:14:58 -05:00