gatk3的最后一个经典版本3.8

David Roazen 34eed20aa6 PerSampleDownsamplingReadsIterator: fix for incorrect use of DOWNSAMPLER_POSITIONAL_UPDATE_INTERVAL ... Notify all downsamplers in our pool of the current global genomic position every DOWNSAMPLER_POSITIONAL_UPDATE_INTERVAL position changes, not every single positional change after that threshold is first reached.		2012-09-21 22:43:39 -04:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	Turn off RR tests while I debug	2012-09-21 17:26:00 -04:00
public	PerSampleDownsamplingReadsIterator: fix for incorrect use of DOWNSAMPLER_POSITIONAL_UPDATE_INTERVAL	2012-09-21 22:43:39 -04:00
settings	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00
.gitignore	a few more useful git ignores	2012-09-01 11:08:36 -04:00
build.xml	Proper error handling in NanoScheduler	2012-09-19 17:03:13 -04:00
ivy.xml	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00