gatk-3.8/public/java
Eric Banks 34b62fa092 Two changes to SelectVariants: 1) don't add DP INFO annotation if DP wasn't used in the input VCF (it was adding DP=0 previously). 2) If MLEAC or MLEAF is present in the original VCF and the number of samples decreases, remove those annotations from the VC. 2012-08-14 12:54:31 -04:00
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config Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
src Two changes to SelectVariants: 1) don't add DP INFO annotation if DP wasn't used in the input VCF (it was adding DP=0 previously). 2) If MLEAC or MLEAF is present in the original VCF and the number of samples decreases, remove those annotations from the VC. 2012-08-14 12:54:31 -04:00
test Two changes to SelectVariants: 1) don't add DP INFO annotation if DP wasn't used in the input VCF (it was adding DP=0 previously). 2) If MLEAC or MLEAF is present in the original VCF and the number of samples decreases, remove those annotations from the VC. 2012-08-14 12:54:31 -04:00