Ryan Poplin 348f2db7fd Fix for HMM optimization. If the two penalty arrays match exactly the function should return the end of the array instead of 0.		2011-11-09 22:00:52 -05:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Fix for HMM optimization. If the two penalty arrays match exactly the function should return the end of the array instead of 0.	2011-11-09 22:00:52 -05:00
test	Bug fix in SelectVariants when using a discordance track but no sample specifications. Added integration test to test this.	2011-11-07 15:25:16 -05:00