gatk3的最后一个经典版本3.8

Mark DePristo 3414ecfe2e Restored serial version of reader initialization. Serial mode is default, as the performance gains aren't so huge. ... -- Serial version can be re-enabled with a static boolean, if we decide to return to the serial version -- Comparison of serial and parallel reader with cached and uncached files: Initialization time: serial with 500 fully cached BAMs: 8.20 seconds Initialization time: serial with 500 uncached BAMs : 197.02 seconds Initialization time: parallel with 500 fully cached BAMs: 30.12 seconds Initialization time: parallel with 500 uncached BAMs : 75.47 seconds		2011-12-16 09:22:10 -05:00
public	Restored serial version of reader initialization. Serial mode is default, as the performance gains aren't so huge.	2011-12-16 09:22:10 -05:00
settings	Revved Picard to incorporate tfennell's AsyncSAMFileWriter.	2011-12-06 10:37:42 -05:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	Extensive unit test for GenotypeContextUnitTest	2011-11-20 18:28:01 -05:00
ivy.xml	Updating the HybridSelectionPipeline for SnpEff 2.0.4 RC3	2011-11-17 14:46:12 -05:00