sathibault 336050ab71 Merge branch 'master' into st_fpga_hmm ... Conflicts: protected/java/src/org/broadinstitute/sting/gatk/walkers/haplotypecaller/HaplotypeCaller.java protected/java/src/org/broadinstitute/sting/gatk/walkers/haplotypecaller/LikelihoodCalculationEngine.java		2013-06-13 07:28:24 -05:00
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src/org/broadinstitute/sting	Merge branch 'master' into st_fpga_hmm	2013-06-13 07:28:24 -05:00
test/org/broadinstitute/sting	@Output needs to be required for LiftoverVariants to prevent a NPE and documentation needed updating.	2013-05-17 10:04:10 -04:00