Mauricio Carneiro 334d66f2b1 Updating validation parameter in the DPP ... users were very confused with the failing validation of their 'unpicarded' bam files. Changed the default to OFF and added an option to turn it on.		2012-06-26 14:54:37 -04:00
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R	Add warning message about ratios in variantQCreport, give ratio for MAF > 10%	2012-04-25 12:22:32 -04:00
c	At chartl's request, add the bwa aln -N and bwa aln -m parameters to the bindings.	2012-01-17 14:47:53 -05:00
chainFiles	…
doc	…
java	Update stable for shptmp -> hptmp migration	2012-06-05 17:38:06 -04:00
keys	Public-key authorization scheme to restrict use of NO_ET	2012-03-06 00:09:43 -05:00
packages	Remove unnecessary and obscure usage of old R	2012-05-01 13:39:09 -04:00
perl	Update to the bindings for liftOverVCF.pl (to -V from -B)	2011-09-15 15:33:09 -04:00
scala	Updating validation parameter in the DPP	2012-06-26 14:54:37 -04:00
testdata	continuing the BQSR triage...	2012-04-05 14:34:15 -04:00