Mauricio Carneiro 333e5de812 returning read instead of GATKSAMRecord ... Do not create new GATKSAMRecord when read has been fully clipped, because it is essentially the same as returning the currently fully clipped read.		2011-11-18 16:49:59 -05:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	returning read instead of GATKSAMRecord	2011-11-18 16:49:59 -05:00
test	During flanking interval creation merging overlapping flanks so that on scatter the list doesn't accidentally genotype the same site twice.	2011-11-17 13:56:42 -05:00