gatk3的最后一个经典版本3.8

David Roazen 32a6d7000a Thread-safe ReadGroupCovariate ... The ReadGroupCovariate class was not thread-safe. This led to horrible race conditions in multithreaded runs of the BQSR where (for example) the same read group could get inserted into the reverse lookup table twice with different IDs. Should fix the intermittent crash reported in GSA-492.		2012-10-24 15:22:50 -04:00
licensing	Final final final version of the license.	2012-07-20 18:00:02 -04:00
protected/java	BQSR: use more granular locking for concurrency control	2012-10-24 15:22:50 -04:00
public	Thread-safe ReadGroupCovariate	2012-10-24 15:22:50 -04:00
settings	Updated google reflections due to stale slf4j version conflicting with other projects also trying to use Queue as a component.	2012-10-16 02:22:30 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Updated google reflections due to stale slf4j version conflicting with other projects also trying to use Queue as a component.	2012-10-16 02:22:30 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Updated google reflections due to stale slf4j version conflicting with other projects also trying to use Queue as a component.	2012-10-16 02:22:30 -04:00