kshakir 8dfa24df7b Sending a version of per job status messages. ... In addition to outputs, inputs are passed to QStatusMessenger.done() CloneFunction.cloneIndex has a new CloneFunction.cloneCount companion useful for display purposes.		2012-10-23 15:55:47 -04:00
..
engine	Sending a version of per job status messages.	2012-10-23 15:55:47 -04:00
extensions	Fixed issues with Queue packaging of Picard QC classes: separate jar's are needed fromPicard. User needs to specify the -picardBase argument to point to input path for jars.	2012-10-23 14:08:31 -04:00
function	Sending a version of per job status messages.	2012-10-23 15:55:47 -04:00
library	Fix edge case for very small VCFs	2012-01-19 00:51:28 -05:00
util	Merge GATK repo into CMI-GATK	2012-10-23 10:59:11 -04:00
QCommandLine.scala	Sending a version of per job status messages.	2012-10-23 15:55:47 -04:00
QCommandPlugin.scala	Added another utility that can convert to RemoteFiles.	2012-10-17 20:00:03 -04:00
QException.scala	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
QScript.scala	Sending a version of per job status messages.	2012-10-23 15:55:47 -04:00
QScriptManager.scala	Fixed package error and a few deprecated scala warnings.	2012-10-15 15:29:40 -04:00
QSettings.scala	Added explicit @ClassType annotations to @Argument for Option[Int] or Option[Double] since scala seems to change the reflected type to Option[Object] on some systems.	2012-10-19 13:20:29 -04:00