Mark DePristo 3227143a1c Systematic test code for FragmentPileup ... -- Creates all combinatinos of overlapping and non-overlapping read pair pileups in all orientations and first/second pairings to validate fragment detection.		2011-10-19 17:50:27 -04:00
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net/sf	Removed annoying FastaSequenceIndexBuilderProgressListener infrastructure that was just a boolean switch on whether to print progress or not.	2011-07-27 22:06:23 -04:00
org/broadinstitute/sting	Systematic test code for FragmentPileup	2011-10-19 17:50:27 -04:00