Mauricio Carneiro 30f013aeb0 Added a copy() method for ReadBackedPileups ... necessary to create new alignment contexts with hard-copies of the pileup.		2012-12-05 01:32:18 -05:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Added a copy() method for ReadBackedPileups	2012-12-05 01:32:18 -05:00
test	Quick fix: base qual array in the GATKSAMRecord stores the actual phred values (-33) and not the original bytes (duh).	2012-12-03 12:18:20 -05:00