Mark DePristo 5a54a4155a Change key Haplotype default parameter values ... -- Extension increased to 200 bp -- Min prune factor defaults to 0 -- LD merging enabled by default for complex variants, only when there are 10+ samples for SNP + SNP merging -- Active region trimming enabled by default		2013-04-08 12:47:50 -04:00
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src/org/broadinstitute/sting	Change key Haplotype default parameter values	2013-04-08 12:47:50 -04:00
test/org/broadinstitute/sting	HaplotypeCaller no longer creates haplotypes that involve cycles in the SeqGraph	2013-04-08 12:47:50 -04:00