gatk-3.8/public/java
Mark DePristo 3066894215 Bugfix for BCF2
-- Always decode genotypes block when writing out a BCF file.  If the header changes (and we currently don't know this easily) then the dictionary keys used in the genotypes block may be invalid.  Temporarily added a private static boolean that turns off writing of the blocks until Eric and his team rewrite the header.

Signed-off-by: Mark DePristo <depristo@broadinstitute.org>
2012-07-25 08:56:38 -04:00
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config
src Bugfix for BCF2 2012-07-25 08:56:38 -04:00
test Fix md5's broken by recent changes to FisherStrand calculation 2012-07-21 14:41:38 -04:00