gatk-3.8/java/src/org/broadinstitute
aaron bd4cacb832 Added code to make a read group and sample name for BAM files that don't annotate them on reads. The defaults for both are now the filename, but this may be shortened in the future.
The sample name for a read can be retrieved with the command:

read.getAttribute(SAMTag.RG.toString());




git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@518 348d0f76-0448-11de-a6fe-93d51630548a
2009-04-24 00:31:00 +00:00
..
sting Added code to make a read group and sample name for BAM files that don't annotate them on reads. The defaults for both are now the filename, but this may be shortened in the future. 2009-04-24 00:31:00 +00:00