kshakir 302e8f0239 Fixed bug where the command directory was not being set to an absolute path, leading LSF to write some .done files to /tmp. ... No longer using the command directory for temporary .done files, and instead using the user specified temporary directory. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4678 348d0f76-0448-11de-a6fe-93d51630548a		2010-11-15 17:59:39 +00:00
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qscript	Now actually checking in the integration test mentioned in the prior commit: compiles the full calling pipeline.	2010-11-14 04:27:10 +00:00
src	Fixed bug where the command directory was not being set to an absolute path, leading LSF to write some .done files to /tmp.	2010-11-15 17:59:39 +00:00
test/org/broadinstitute/sting/queue	Now actually checking in the integration test mentioned in the prior commit: compiles the full calling pipeline.	2010-11-14 04:27:10 +00:00